SNP Detail For rs9315632
1.Mapping Information
Human SNP ID rs9315632
Human chromosome chr13
Human SNP position 38942490
Pig chromosome chr18
Pig SNP position 29792113
2.Annotation Information
PubMed ID20694148
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/20694148
StudyA genome-wide association study of the metabolic syndrome in Indian Asian men.
Disease/TraitMetabolic syndrome
Initial sample2,554 Indian Asian ancestry individuals
Replication sample2,240 Indian Asian ancestry individuals
Region13q13.3
Chromosome idchr13
Chromosome position38942490
Reported geneSTOML3
Mapped geneFREM2 - STOML3
Upstream gene id341640
Downstream gene id161003
SNP gene ids
Upstream gene distance55359
Downstream gene distance23435
SNP risk allelers9315632-?
SNPsrs9315632
Merged0
SNP id current9315632
Contextintergenic_variant
Intergenic1
Allele frequency0.28
P value0.000003
Pvalue mlog5.52287874528033
P value text(WHR)
Or beta
%95 Ci
PlatformIllumina [308011]
CNVN
Mapped traitwaist-hip ratio, metabolic syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0000195
Study accessionGCST000753