Human SNP ID | rs9313296 |
---|---|
Human chromosome | chr5 |
Human SNP position | 165950694 |
Pig chromosome | chr16 |
Pig SNP position | 62523547 |
PubMed ID | 20966902 |
---|---|
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/20966902 |
Study | Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. |
Disease/Trait | Weight |
Initial sample | 1,780 Filipino ancestry females |
Replication sample | NA |
Region | 5q34 |
Chromosome id | chr5 |
Chromosome position | 165950694 |
Reported gene | intergenic |
Mapped gene | RPL21P59 - RPL7P20 |
Upstream gene id | 100271174 |
Downstream gene id | 728843 |
SNP gene ids | |
Upstream gene distance | 45057 |
Downstream gene distance | 77790 |
SNP risk allele | rs9313296-C |
SNPs | rs9313296 |
Merged | 0 |
SNP id current | 9313296 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.01 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 10 |
%95 Ci | [6.07-13.93] kg increase |
Platform | Affymetrix [2073674] (imputed) |
CNV | N |
Mapped trait | body weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004338 |
Study accession | GCST000837 |
PubMed ID | 20966902 |
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/20966902 |
Study | Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. |
Disease/Trait | Waist circumference |
Initial sample | 1,779 Filipino ancestry females |
Replication sample | NA |
Region | 5q34 |
Chromosome id | chr5 |
Chromosome position | 165950694 |
Reported gene | intergenic |
Mapped gene | RPL21P59 - RPL7P20 |
Upstream gene id | 100271174 |
Downstream gene id | 728843 |
SNP gene ids | |
Upstream gene distance | 45057 |
Downstream gene distance | 77790 |
SNP risk allele | rs9313296-C |
SNPs | rs9313296 |
Merged | 0 |
SNP id current | 9313296 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.01 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 9.4 |
%95 Ci | [5.35-13.45] cm increase |
Platform | Affymetrix [2073674] (imputed) |
CNV | N |
Mapped trait | waist circumference |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004342 |
Study accession | GCST000838 |