Human SNP ID | rs9311745 |
---|---|
Human chromosome | chr3 |
Human SNP position | 60016099 |
Pig chromosome | chr13 |
Pig SNP position | 45827823 |
PubMed ID | 23470693 |
---|---|
Journal | J Dent Res |
Link | www.ncbi.nlm.nih.gov/pubmed/23470693 |
Study | Genome-wide association studies of pit-and-fissure- and smooth-surface caries in permanent dentition. |
Disease/Trait | Pit-and-Fissure caries |
Initial sample | 996 European ancestry individuals |
Replication sample | |
Region | 3p14.2 |
Chromosome id | chr3 |
Chromosome position | 60016099 |
Reported gene | NR |
Mapped gene | FHIT |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2272 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9311745-C |
SNPs | rs9311745 |
Merged | 0 |
SNP id current | 9311745 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0466 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 2.9914 |
%95 Ci | [NR] unit increase |
Platform | Illumina [1200000] (imputed) |
CNV | N |
Mapped trait | pit and fissure surface dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006338 |
Study accession | GCST001897 |