SNP Detail For rs9309515
1.Mapping Information
Human SNP ID rs9309515
Human chromosome chr2
Human SNP position 77391275
Pig chromosome chr3
Pig SNP position 69591041
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (linoleic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region2p12
Chromosome idchr2
Chromosome position77391275
Reported geneNR
Mapped geneLRRTM4
Upstream gene id
Downstream gene id
SNP gene ids80059
Upstream gene distance
Downstream gene distance
SNP risk allelers9309515-T
SNPsrs9309515
Merged
SNP id current9309515
Contextintron_variant
Intergenic0
Allele frequency0.0931
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.0394
%95 Ci[0.023-0.056] unit decrease
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped traitlinoleic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006807
Study accessionGCST003239