Human SNP ID | rs9309515 |
---|---|
Human chromosome | chr2 |
Human SNP position | 77391275 |
Pig chromosome | chr3 |
Pig SNP position | 69591041 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-6 polyunsaturated fatty acid levels (linoleic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 2p12 |
Chromosome id | chr2 |
Chromosome position | 77391275 |
Reported gene | NR |
Mapped gene | LRRTM4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 80059 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9309515-T |
SNPs | rs9309515 |
Merged | |
SNP id current | 9309515 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0931 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.0394 |
%95 Ci | [0.023-0.056] unit decrease |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | linoleic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006807 |
Study accession | GCST003239 |