Human SNP ID | rs9304742 |
---|---|
Human chromosome | chr19 |
Human SNP position | 52948038 |
Pig chromosome | chr10 |
Pig SNP position | 67379385 |
PubMed ID | 25903422 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/25903422 |
Study | Genome-wide meta-analysis identifies multiple novel associations and ethnic heterogeneity of psoriasis susceptibility. |
Disease/Trait | Psoriasis |
Initial sample | 3,496 European ancestry cases, 5,186 European ancestry controls, 1,588 Chinese ancestry cases, 3,546 Chinese ancestry controls |
Replication sample | 5,134 European ancestry cases, 5,633 European ancestry controls, 5,151 Chinese ancestry cases, 5,152 Chinese ancestry controls |
Region | 19q13.41 |
Chromosome id | chr19 |
Chromosome position | 52948038 |
Reported gene | ZNF816A |
Mapped gene | ZNF816-ZNF321P |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100529240 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9304742-T |
SNPs | rs9304742 |
Merged | 0 |
SNP id current | 9304742 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.643 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | |
Or beta | 1.17 |
%95 Ci | [1.1-1.25] |
Platform | Illumina [up to 4778154] (imputed) |
CNV | N |
Mapped trait | psoriasis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000676 |
Study accession | GCST002874 |