Human SNP ID | rs9298506 |
---|---|
Human chromosome | chr8 |
Human SNP position | 54524964 |
Pig chromosome | chr4 |
Pig SNP position | 83860713 |
PubMed ID | 18997786 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18997786 |
Study | Susceptibility loci for intracranial aneurysm in European and Japanese populations. |
Disease/Trait | Intracranial aneurysm |
Initial sample | 1,580 European ancestry cases, 6,276 European ancestry controls |
Replication sample | 495 Japanese ancestry cases, 676 Japanese ancestry controls |
Region | 8q11.23 |
Chromosome id | chr8 |
Chromosome position | 54524964 |
Reported gene | SOX17 |
Mapped gene | SEC11B - RP1 |
Upstream gene id | 157708 |
Downstream gene id | 6101 |
SNP gene ids | |
Upstream gene distance | 1583 |
Downstream gene distance | 91103 |
SNP risk allele | rs9298506-A |
SNPs | rs9298506 |
Merged | 0 |
SNP id current | 9298506 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.81 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 1.35 |
%95 Ci | [1.22-1.49] |
Platform | Illumina [289271] |
CNV | N |
Mapped trait | brain aneurysm |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003870 |
Study accession | GCST000262 |
PubMed ID | 20364137 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20364137 |
Study | Genome-wide association study of intracranial aneurysm identifies three new risk loci. |
Disease/Trait | Intracranial aneurysm |
Initial sample | 2,780 European ancestry cases, 12,515 European ancestry controls |
Replication sample | 3,111 Japanese ancestry cases, 1,666 Japanese ancestry controls |
Region | 8q11.23 |
Chromosome id | chr8 |
Chromosome position | 54524964 |
Reported gene | SOX17 |
Mapped gene | SEC11B - RP1 |
Upstream gene id | 157708 |
Downstream gene id | 6101 |
SNP gene ids | |
Upstream gene distance | 1583 |
Downstream gene distance | 91103 |
SNP risk allele | rs9298506-A |
SNPs | rs9298506 |
Merged | 0 |
SNP id current | 9298506 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.81 |
P value | 0.000000000001 |
Pvalue mlog | 12 |
P value text | |
Or beta | 1.28 |
%95 Ci | [1.20-1.38] |
Platform | Illumina [831534] (imputed) |
CNV | N |
Mapped trait | brain aneurysm |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003870 |
Study accession | GCST000646 |