SNP Detail For rs9296736
1.Mapping Information
Human SNP ID rs9296736
Human chromosome chr6
Human SNP position 54059899
Pig chromosome chr7
Pig SNP position 31198425
2.Annotation Information
PubMed ID22001757
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22001757
StudyGenome-wide association study identifies loci influencing concentrations of liver enzymes in plasma.
Disease/TraitLiver enzyme levels (gamma-glutamyl transferase)
Initial sampleUp to 52,350 European ancestry individuals, up to 8,739 Indian Asian ancestry individuals
Replication sampleNA
Region6p12.1
Chromosome idchr6
Chromosome position54059899
Reported geneMLIP
Mapped geneMLIP
Upstream gene id
Downstream gene id
SNP gene ids90523
Upstream gene distance
Downstream gene distance
SNP risk allelers9296736-T
SNPsrs9296736
Merged0
SNP id current9296736
Contextintron_variant
Intergenic0
Allele frequency0.31
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta3
%95 Ci[2.10-4.00] % increase
PlatformAffymetrix, Illumina, Perlegen [~ 2600000] (imputed)
CNVN
Mapped traitserum gamma-glutamyl transferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004532
Study accessionGCST001277