Human SNP ID | rs9295474 |
---|---|
Human chromosome | chr6 |
Human SNP position | 20652486 |
Pig chromosome | chr7 |
Pig SNP position | 16924141 |
PubMed ID | 21490949 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21490949 |
Study | Transferability of type 2 diabetes implicated loci in multi-ethnic cohorts from Southeast Asia. |
Disease/Trait | Type 2 diabetes |
Initial sample | 2,010 Chinese ancestry cases, 1,945 Chinese ancestry controls, 794 Malay ancestry cases, 1,240 Malay ancestry controls, 977 Asian Indian ancestry cases, 1,169 Asian Indian ancestry controls |
Replication sample | NA |
Region | 6p22.3 |
Chromosome id | chr6 |
Chromosome position | 20652486 |
Reported gene | CDKAL1 |
Mapped gene | CDKAL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54901 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9295474-G |
SNPs | rs9295474 |
Merged | 0 |
SNP id current | 9295474 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.36 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Chinese+Malay+Indian) |
Or beta | 1.16 |
%95 Ci | [1.09-1.24] |
Platform | Illumina [~ 2000000] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001033 |