SNP Detail For rs9295474
1.Mapping Information
Human SNP ID rs9295474
Human chromosome chr6
Human SNP position 20652486
Pig chromosome chr7
Pig SNP position 16924141
2.Annotation Information
PubMed ID21490949
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21490949
StudyTransferability of type 2 diabetes implicated loci in multi-ethnic cohorts from Southeast Asia.
Disease/TraitType 2 diabetes
Initial sample2,010 Chinese ancestry cases, 1,945 Chinese ancestry controls, 794 Malay ancestry cases, 1,240 Malay ancestry controls, 977 Asian Indian ancestry cases, 1,169 Asian Indian ancestry controls
Replication sampleNA
Region6p22.3
Chromosome idchr6
Chromosome position20652486
Reported geneCDKAL1
Mapped geneCDKAL1
Upstream gene id
Downstream gene id
SNP gene ids54901
Upstream gene distance
Downstream gene distance
SNP risk allelers9295474-G
SNPsrs9295474
Merged0
SNP id current9295474
Contextintron_variant
Intergenic0
Allele frequency0.36
P value0.000009
Pvalue mlog5.04575749056067
P value text(Chinese+Malay+Indian)
Or beta1.16
%95 Ci[1.09-1.24]
PlatformIllumina [~ 2000000] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST001033