Human SNP ID | rs9290936 |
---|---|
Human chromosome | chr3 |
Human SNP position | 190534846 |
Pig chromosome | chr13 |
Pig SNP position | 137399125 |
PubMed ID | 20966902 |
---|---|
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/20966902 |
Study | Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. |
Disease/Trait | Waist circumference |
Initial sample | 1,779 Filipino ancestry females |
Replication sample | NA |
Region | 3q28 |
Chromosome id | chr3 |
Chromosome position | 190534846 |
Reported gene | IL1RAP |
Mapped gene | IL1RAP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3556 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9290936-G |
SNPs | rs9290936 |
Merged | 0 |
SNP id current | 9290936 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.61 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.79 |
%95 Ci | [1.03-2.55] cm increase |
Platform | Affymetrix [2073674] (imputed) |
CNV | N |
Mapped trait | waist circumference |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004342 |
Study accession | GCST000838 |