SNP Detail For rs9290065
1.Mapping Information
Human SNP ID rs9290065
Human chromosome chr3
Human SNP position 161059176
Pig chromosome chr13
Pig SNP position 109137666
2.Annotation Information
PubMed ID22446961
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22446961
StudyTwo new susceptibility loci for Kawasaki disease identified through genome-wide association analysis.
Disease/TraitKawasaki disease
Initial sample622 Han Chinese ancestry cases, 1,107 Han Chinese ancestry controls
Replication sample261 Han Chinese ancestry cases, 550 Han Chinese ancestry controls
Region3q26.1
Chromosome idchr3
Chromosome position161059176
Reported genePPM1L
Mapped genePPM1L
Upstream gene id
Downstream gene id
SNP gene ids151742
Upstream gene distance
Downstream gene distance
SNP risk allelers9290065-G
SNPsrs9290065
Merged0
SNP id current9290065
Contextintron_variant
Intergenic0
Allele frequency0.02
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta2.119
%95 Ci[1.508-2.979]
PlatformAffymetrix [716935]
CNVN
Mapped traitmucocutaneous lymph node syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004246
Study accessionGCST001456