SNP Detail For rs9273363
1.Mapping Information
Human SNP ID rs9273363
Human chromosome chr6
Human SNP position 32658495
Pig chromosome chr7
Pig SNP position 29179668
2.Annotation Information
PubMed ID23770605
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23770605
StudyGenome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia.
Disease/TraitChronic lymphocytic leukemia
Initial sample2,179 European ancestry cases, 6,221 European ancestry controls
Replication sample1,709 European ancestry cases, 6,318 European ancestry controls
Region6p21.32
Chromosome idchr6
Chromosome position32658495
Reported geneHLA
Mapped geneHLA-DQA1 - HLA-DQB1
Upstream gene id3117
Downstream gene id3119
SNP gene ids
Upstream gene distance3721
Downstream gene distance969
SNP risk allelers9273363-A
SNPsrs9273363
Merged0
SNP id current9273363
Contextupstream_gene_variant
Intergenic1
Allele frequency0.27
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta1.24
%95 Ci[NR]
PlatformIllumina [549934]
CNVN
Mapped traitchronic lymphocytic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000095
Study accessionGCST002073