Human SNP ID | rs9273363 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32658495 |
Pig chromosome | chr7 |
Pig SNP position | 29179668 |
PubMed ID | 23770605 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23770605 |
Study | Genome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia. |
Disease/Trait | Chronic lymphocytic leukemia |
Initial sample | 2,179 European ancestry cases, 6,221 European ancestry controls |
Replication sample | 1,709 European ancestry cases, 6,318 European ancestry controls |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32658495 |
Reported gene | HLA |
Mapped gene | HLA-DQA1 - HLA-DQB1 |
Upstream gene id | 3117 |
Downstream gene id | 3119 |
SNP gene ids | |
Upstream gene distance | 3721 |
Downstream gene distance | 969 |
SNP risk allele | rs9273363-A |
SNPs | rs9273363 |
Merged | 0 |
SNP id current | 9273363 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.27 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | |
Or beta | 1.24 |
%95 Ci | [NR] |
Platform | Illumina [549934] |
CNV | N |
Mapped trait | chronic lymphocytic leukemia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000095 |
Study accession | GCST002073 |