SNP Detail For rs9273349
1.Mapping Information
Human SNP ID rs9273349
Human chromosome chr6
Human SNP position 32658092
Pig chromosome chr7
Pig SNP position 29179273
2.Annotation Information
PubMed ID20860503
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/20860503
StudyA large-scale, consortium-based genomewide association study of asthma.
Disease/TraitAsthma
Initial sample10,365 cases, 16,110 controls
Replication sampleNA
Region6p21.32
Chromosome idchr6
Chromosome position32658092
Reported geneHLA-DQ
Mapped geneHLA-DQA1 - HLA-DQB1
Upstream gene id3117
Downstream gene id3119
SNP gene ids
Upstream gene distance3318
Downstream gene distance1372
SNP risk allelers9273349-C
SNPsrs9273349
Merged0
SNP id current9273349
Contextupstream_gene_variant
Intergenic1
Allele frequency0.58
P value0.00000000000007
Pvalue mlog13.1549019599857
P value text
Or beta1.18
%95 Ci[1.13-1.24]
PlatformIllumina [582892]
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST000804