SNP Detail For rs9268905
1.Mapping Information
Human SNP ID rs9268905
Human chromosome chr6
Human SNP position 32464300
Pig chromosome chr7
Pig SNP position 29102296
2.Annotation Information
PubMed ID21602797
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21602797
StudyGenome-wide association and linkage identify modifier loci of lung disease severity in cystic fibrosis at 11p13 and 20q13.2.
Disease/TraitCystic fibrosis severity
Initial sample2,317 European ancestry cases, 177 cases
Replication sample898 European ancestry sibling pair cases, 75 sibling pair cases
Region6p21.32
Chromosome idchr6
Chromosome position32464300
Reported geneHLA-DRA
Mapped geneHLA-DRA - HLA-DRB5
Upstream gene id3122
Downstream gene id3127
SNP gene ids
Upstream gene distance19254
Downstream gene distance53074
SNP risk allelers9268905-C
SNPsrs9268905
Merged0
SNP id current9268905
Contextintron_variant
Intergenic1
Allele frequency0.32
P value0.0000001
Pvalue mlog7
P value text
Or beta
%95 Ci
PlatformIllumina [~ 2609000] (imputed)
CNVN
Mapped traitCystic fibrosis
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_586
Study accessionGCST001077