Human SNP ID | rs926849 |
---|---|
Human chromosome | chr6 |
Human SNP position | 161740587 |
Pig chromosome | chr1 |
Pig SNP position | 7853597 |
PubMed ID | 22993228 |
---|---|
Journal | Ann Rheum Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/22993228 |
Study | Novel genetic variants associated with lumbar disc degeneration in northern Europeans: a meta-analysis of 4600 subjects. |
Disease/Trait | Disc degeneration (lumbar) |
Initial sample | 4,683 European ancestry individuals |
Replication sample | NA |
Region | 6q26 |
Chromosome id | chr6 |
Chromosome position | 161740587 |
Reported gene | PARK2 |
Mapped gene | PARK2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5071 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs926849-C |
SNPs | rs926849 |
Merged | 0 |
SNP id current | 926849 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.31 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 0.13 |
%95 Ci | [0.083-0.177] unit decrease |
Platform | Affymetrix, Illumina [2552511] (imputed) |
CNV | N |
Mapped trait | lumbar disc degeneration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004994 |
Study accession | GCST001687 |