SNP Detail For rs9267673
1.Mapping Information
Human SNP ID rs9267673
Human chromosome chr6
Human SNP position 31915902
Pig chromosome chr7
Pig SNP position 27804966
2.Annotation Information
PubMed ID21105107
JournalHepatology
Linkwww.ncbi.nlm.nih.gov/pubmed/21105107
StudyGenetic variations at loci involved in the immune response are risk factors for hepatocellular carcinoma.
Disease/TraitHepatocellular carcinoma
Initial sample180 Korean ancestry cases, 271 Korean ancestry controls
Replication sample206 Korean ancestry cases, 416 East Asian ancestry controls,
Region6p21.33
Chromosome idchr6
Chromosome position31915902
Reported geneC2
Mapped geneC2
Upstream gene id
Downstream gene id
SNP gene ids717
Upstream gene distance
Downstream gene distance
SNP risk allelers9267673-?
SNPsrs9267673
Merged0
SNP id current9267673
Contextintron_variant
Intergenic0
Allele frequency0.08
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.97
%95 Ci[1.47-2.64]
PlatformAffymetrix [658897]
CNVN
Mapped traithepatocellular carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000182
Study accessionGCST000902