Human SNP ID | rs925946 |
---|---|
Human chromosome | chr11 |
Human SNP position | 27645655 |
Pig chromosome | chr2 |
Pig SNP position | 35275175 |
PubMed ID | 19079260 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19079260 |
Study | Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity. |
Disease/Trait | Weight |
Initial sample | 72,598 European ancestry individuals, 1,160 African American individuals |
Replication sample | Up to 11,036 European ancestry individuals, 32,615 individuals |
Region | 11p14.1 |
Chromosome id | chr11 |
Chromosome position | 27645655 |
Reported gene | BDNF |
Mapped gene | BDNF-AS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 497258 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs925946-T |
SNPs | rs925946 |
Merged | 0 |
SNP id current | 925946 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.34 |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | |
Or beta | 3.8 |
%95 Ci | [2.55-5.05] percentage SD increase |
Platform | Illumina [305846] |
CNV | N |
Mapped trait | body weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004338 |
Study accession | GCST000299 |
PubMed ID | 19079260 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19079260 |
Study | Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity. |
Disease/Trait | Body mass index |
Initial sample | 72,598 European ancestry individuals, 1,160 African American individuals |
Replication sample | Up to 11,036 European ancestry individuals, 32,615 individuals |
Region | 11p14.1 |
Chromosome id | chr11 |
Chromosome position | 27645655 |
Reported gene | BDNF |
Mapped gene | BDNF-AS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 497258 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs925946-T |
SNPs | rs925946 |
Merged | 0 |
SNP id current | 925946 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.34 |
P value | 0.0000000009 |
Pvalue mlog | 9.04575749056067 |
P value text | |
Or beta | 3.85 |
%95 Ci | [2.62-5.08] % SD increase |
Platform | Illumina [305846] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST000296 |