Human SNP ID | rs9257616 |
---|---|
Human chromosome | chr6 |
Human SNP position | 29212944 |
Pig chromosome | chr7 |
Pig SNP position | 26032116 |
PubMed ID | 24047820 |
---|---|
Journal | Mol Autism |
Link | www.ncbi.nlm.nih.gov/pubmed/24047820 |
Study | Common variation contributes to the genetic architecture of social communication traits. |
Disease/Trait | Social communication problems |
Initial sample | 5,584 European ancestry children |
Replication sample | 1,364 European ancestry children |
Region | 6p22.1 |
Chromosome id | chr6 |
Chromosome position | 29212944 |
Reported gene | OR2J2, TRIM27, ZNF311, OR2W1, OR2B3, LOC651503, OR214J1, OR5V1, OR12D3, OR2J3 |
Mapped gene | LOC105375006 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105375006 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9257616-G |
SNPs | rs9257616 |
Merged | 0 |
SNP id current | 9257616 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.56 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | 0.093 |
%95 Ci | [0.058-0.128] unit increase |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | social communication impairment |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005427 |
Study accession | GCST002194 |