SNP Detail For rs920915
1.Mapping Information
Human SNP ID rs920915
Human chromosome chr15
Human SNP position 58396268
Pig chromosome chr1
Pig SNP position 125704892
2.Annotation Information
PubMed ID23455636
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23455636
StudySeven new loci associated with age-related macular degeneration.
Disease/TraitAge-related macular degeneration
Initial sample6,713 European ancestry cases, 48,402 European ancestry contols, 110 Southern Indian ancestry cases, 119 Southern Indian ancestry controls, 827 Japanese ancestry cases, 3,323 Japanese ancestry controls
Replication sample9,070 European ancestry cases, 7,683 European ancestry contols, 461 East Asian ancestry cases, 547 East Asian ancestry controls
Region15q21.3
Chromosome idchr15
Chromosome position58396268
Reported geneLIPC
Mapped geneLOC102724766
Upstream gene id
Downstream gene id
SNP gene ids102724766
Upstream gene distance
Downstream gene distance
SNP risk allelers920915-C
SNPsrs920915
Merged0
SNP id current920915
Contextintron_variant
Intergenic0
Allele frequency0.48
P value0.00000000003
Pvalue mlog10.5228787452803
P value text
Or beta1.13
%95 Ci[1.09-1.17]
PlatformAffymetrix, Illumina [2442884] (imputed)
CNVN
Mapped traitage-related macular degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001365
Study accessionGCST001884