SNP Detail For rs918629
1.Mapping Information
Human SNP ID rs918629
Human chromosome chr5
Human SNP position 95965759
Pig chromosome chr2
Pig SNP position 106479258
2.Annotation Information
PubMed ID23382691
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23382691
StudyLoci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
Disease/TraitIgG glycosylation
Initial sample2,247 European ancestry individuals
Replication sampleNA
Region5q15
Chromosome idchr5
Chromosome position95965759
Reported geneNR
Mapped geneLOC101929710, LOC105379097
Upstream gene id
Downstream gene id
SNP gene ids101929710, 105379097
Upstream gene distance
Downstream gene distance
SNP risk allelers918629-G
SNPsrs918629
Merged0
SNP id current918629
Contextintron_variant
Intergenic0
Allele frequency0.745524385574354
P value0.000001
Pvalue mlog6
P value text(IGP15)
Or beta0.1737
%95 Ci[0.1-0.24] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitserum IgG glycosylation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005193
Study accessionGCST001848