SNP Detail For rs915832
1.Mapping Information
Human SNP ID rs915832
Human chromosome chr21
Human SNP position 41855386
Pig chromosome chr13
Pig SNP position 215539780
2.Annotation Information
PubMed ID23006423
JournalBMC Cancer
Linkwww.ncbi.nlm.nih.gov/pubmed/23006423
StudyGenetic association with overall survival of taxane-treated lung cancer patients - A genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study.
Disease/TraitResponse to taxane treatment (placlitaxel)
Initial sample96 African American lymphoblastoid cell lines, 96 European ancestry lymphoblastoid cell lines, 96 Han Chinese ancestry lymphoblastoid cell lines
Replication sampleNA
Region21q22.3
Chromosome idchr21
Chromosome position41855386
Reported genePRDM15
Mapped genePRDM15
Upstream gene id
Downstream gene id
SNP gene ids63977
Upstream gene distance
Downstream gene distance
SNP risk allelers915832-?
SNPsrs915832
Merged0
SNP id current915832
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 1300000]
CNVN
Mapped traitresponse to paclitaxel
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_1901555
Study accessionGCST001694