SNP Detail For rs912969
1.Mapping Information
Human SNP ID rs912969
Human chromosome chr13
Human SNP position 103214754
Pig chromosome chr11
Pig SNP position 78749562
2.Annotation Information
PubMed ID19247474
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/19247474
StudyGenome-wide and candidate gene association study of cigarette smoking behaviors.
Disease/TraitSmoking behavior
Initial sample2,617 European ancestry smokers, 1,725 European ancestry controls
Replication sampleNA
Region13q33.1
Chromosome idchr13
Chromosome position103214754
Reported geneintergenic
Mapped geneSLC10A2 - LOC105370338
Upstream gene id6555
Downstream gene id105370338
SNP gene ids
Upstream gene distance147908
Downstream gene distance76215
SNP risk allelers912969-?
SNPsrs912969
Merged0
SNP id current912969
Contextintergenic_variant
Intergenic1
Allele frequency0.07
P value0.000008
Pvalue mlog5.09691001300805
P value text(SMKDU)
Or beta0.14
%95 Ci[NR] years decrease
PlatformIllumina [~ 518000]
CNVN
Mapped traitsmoking behavior
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318
Study accessionGCST000349