Human SNP ID | rs908821 |
---|---|
Human chromosome | chr3 |
Human SNP position | 140821876 |
Pig chromosome | chr13 |
Pig SNP position | 89478950 |
PubMed ID | 19010793 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19010793 |
Study | Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 978 European ancestry cases, 883 European ancestry controls |
Replication sample | NA |
Region | 3q23 |
Chromosome id | chr3 |
Chromosome position | 140821876 |
Reported gene | SLC25A36 |
Mapped gene | TRIM42 - SLC25A36 |
Upstream gene id | 287015 |
Downstream gene id | 55186 |
SNP gene ids | |
Upstream gene distance | 120726 |
Downstream gene distance | 119944 |
SNP risk allele | rs908821-? |
SNPs | rs908821 |
Merged | 0 |
SNP id current | 908821 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.71 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.37 |
%95 Ci | [NR] |
Platform | Illumina [551642] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST000269 |