SNP Detail For rs907499
1.Mapping Information
Human SNP ID rs907499
Human chromosome chr4
Human SNP position 26135397
Pig chromosome chr8
Pig SNP position 20278461
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region4p15.2
Chromosome idchr4
Chromosome position26135397
Reported geneLOC645481
Mapped geneLOC645481 - LOC105374541
Upstream gene id645481
Downstream gene id105374541
SNP gene ids
Upstream gene distance19445
Downstream gene distance16568
SNP risk allelers907499-G
SNPsrs907499
Merged0
SNP id current907499
Contextintergenic_variant
Intergenic1
Allele frequency0.016
P value0.000004
Pvalue mlog5.39794000867203
P value text(Snack intake )
Or beta0.05
%95 Ci[NR] kcal increase
PlatformIllumina [899892]
CNVN
Mapped traitenergy intake
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003939
Study accessionGCST001762