SNP Detail For rs898518
1.Mapping Information
Human SNP ID rs898518
Human chromosome chr4
Human SNP position 108095668
Pig chromosome chr8
Pig SNP position 122161170
2.Annotation Information
PubMed ID23770605
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23770605
StudyGenome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia.
Disease/TraitChronic lymphocytic leukemia
Initial sample2,179 European ancestry cases, 6,221 European ancestry controls
Replication sample1,709 European ancestry cases, 6,318 European ancestry controls
Region4q25
Chromosome idchr4
Chromosome position108095668
Reported geneLEF1
Mapped geneLEF1
Upstream gene id
Downstream gene id
SNP gene ids51176
Upstream gene distance
Downstream gene distance
SNP risk allelers898518-A
SNPsrs898518
Merged0
SNP id current898518
Contextintron_variant
Intergenic0
Allele frequency0.59
P value0.0000000004
Pvalue mlog9.39794000867203
P value text
Or beta1.2
%95 Ci[1.14-1.27]
PlatformIllumina [549934]
CNVN
Mapped traitchronic lymphocytic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000095
Study accessionGCST002073