Human SNP ID | rs898518 |
---|---|
Human chromosome | chr4 |
Human SNP position | 108095668 |
Pig chromosome | chr8 |
Pig SNP position | 122161170 |
PubMed ID | 23770605 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23770605 |
Study | Genome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia. |
Disease/Trait | Chronic lymphocytic leukemia |
Initial sample | 2,179 European ancestry cases, 6,221 European ancestry controls |
Replication sample | 1,709 European ancestry cases, 6,318 European ancestry controls |
Region | 4q25 |
Chromosome id | chr4 |
Chromosome position | 108095668 |
Reported gene | LEF1 |
Mapped gene | LEF1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51176 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs898518-A |
SNPs | rs898518 |
Merged | 0 |
SNP id current | 898518 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.59 |
P value | 0.0000000004 |
Pvalue mlog | 9.39794000867203 |
P value text | |
Or beta | 1.2 |
%95 Ci | [1.14-1.27] |
Platform | Illumina [549934] |
CNV | N |
Mapped trait | chronic lymphocytic leukemia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000095 |
Study accession | GCST002073 |