SNP Detail For rs893818
1.Mapping Information
Human SNP ID rs893818
Human chromosome chr15
Human SNP position 73936854
Pig chromosome chr7
Pig SNP position 64116621
2.Annotation Information
PubMed ID24938310
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/24938310
StudyNovel common variants and susceptible haplotype for exfoliation glaucoma specific to Asian population.
Disease/TraitExfoliation glaucoma or exfoliation syndrome
Initial sample201 Japanese ancestry cases, 697 Japanese ancestry controls
Replication sample121 Japanese ancestry cases, 263 Japanese ancestry controls
Region15q24.1
Chromosome idchr15
Chromosome position73936854
Reported geneLOXL1
Mapped geneLOXL1
Upstream gene id
Downstream gene id
SNP gene ids4016
Upstream gene distance
Downstream gene distance
SNP risk allelers893818-T
SNPsrs893818
Merged0
SNP id current893818
Contextintron_variant
Intergenic0
Allele frequency0.535
P value3E-84
Pvalue mlog83.5228787452803
P value text
Or beta20.94
%95 Ci[13.98-31.39]
PlatformAffymetrix [652792]
CNVN
Mapped traitexfoliation syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004235
Study accessionGCST002486