SNP Detail For rs892877
1.Mapping Information
Human SNP ID rs892877
Human chromosome chr2
Human SNP position 137115777
Pig chromosome chr15
Pig SNP position 17099024
2.Annotation Information
PubMed ID24124411
JournalGenomics Inform
Linkwww.ncbi.nlm.nih.gov/pubmed/24124411
StudyGenome-wide association study of liver enzymes in korean children.
Disease/TraitLiver enzyme levels (aspartate transaminase)
Initial sample484 Korean ancestry children
Replication sampleNA
Region2q22.1
Chromosome idchr2
Chromosome position137115777
Reported geneTHSD7B
Mapped geneTHSD7B
Upstream gene id
Downstream gene id
SNP gene ids80731
Upstream gene distance
Downstream gene distance
SNP risk allelers892877-A
SNPsrs892877
Merged0
SNP id current892877
Contextintron_variant
Intergenic0
Allele frequency0.18
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.032
%95 Ci[0.018-0.046] unit decrease
PlatformIllumina [747076]
CNVN
Mapped traitaspartate aminotransferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004736
Study accessionGCST002208