Human SNP ID | rs89107 |
---|---|
Human chromosome | chr6 |
Human SNP position | 118256880 |
Pig chromosome | chr1 |
Pig SNP position | 49169799 |
PubMed ID | 19584346 |
---|---|
Journal | JAMA |
Link | www.ncbi.nlm.nih.gov/pubmed/19584346 |
Study | Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data. |
Disease/Trait | Cardiac structure and function |
Initial sample | 12,612 European ancestry individuals |
Replication sample | 4,094 European ancestry individuals |
Region | 6q22.31 |
Chromosome id | chr6 |
Chromosome position | 118256880 |
Reported gene | C6orf204, SLC35F1, PLN |
Mapped gene | SLC35F1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 222553 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs89107-G |
SNPs | rs89107 |
Merged | 0 |
SNP id current | 89107 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.5 |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | (LV internal diastolic dimensions) |
Or beta | 0.03 |
%95 Ci | [0.02-0.04] cm decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | cardiovascular measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004298 |
Study accession | GCST000441 |