SNP Detail For rs889956
1.Mapping Information
Human SNP ID rs889956
Human chromosome chr2
Human SNP position 57177699
Pig chromosome chr3
Pig SNP position 88894876
2.Annotation Information
PubMed ID25201988
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/25201988
StudyCommon genetic variants associated with cognitive performance identified using the proxy-phenotype method.
Disease/TraitEducational attainment
Initial sample106,736 European ancestry individuals
Replication sampleNA
Region2p16.1
Chromosome idchr2
Chromosome position57177699
Reported geneintergenic
Mapped geneLOC101927213 - LOC105377632
Upstream gene id101927213
Downstream gene id105377632
SNP gene ids
Upstream gene distance581786
Downstream gene distance112177
SNP risk allelers889956-A
SNPsrs889956
Merged0
SNP id current889956
Contextintergenic_variant
Intergenic1
Allele frequency0.397
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta0.023
%95 Ci[NR] unit decrease
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitself reported educational attainment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004784
Study accessionGCST002598