Human SNP ID | rs889472 |
---|---|
Human chromosome | chr16 |
Human SNP position | 79612092 |
Pig chromosome | chr6 |
Pig SNP position | 8548283 |
PubMed ID | 22797727 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22797727 |
Study | Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations. |
Disease/Trait | Renal function-related traits (urea) |
Initial sample | 21,417 East Asian ancestry individuals |
Replication sample | 11,657 East Asian ancestry individuals |
Region | 16q23.2 |
Chromosome id | chr16 |
Chromosome position | 79612092 |
Reported gene | MAF |
Mapped gene | LOC101928230 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928230 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs889472-C |
SNPs | rs889472 |
Merged | 0 |
SNP id current | 889472 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.57 |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | |
Or beta | 0.0711 |
%95 Ci | [0.048-0.094] mg/dl increase |
Platform | Affymetrix, Illumina [2278301] (imputed) |
CNV | N |
Mapped trait | renal system measurement, uric acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004742, http://www.ebi.ac.uk/efo/EFO_0004761 |
Study accession | GCST001608 |