SNP Detail For rs888219
1.Mapping Information
Human SNP ID rs888219
Human chromosome chr9
Human SNP position 126166744
Pig chromosome chr1
Pig SNP position 300696271
2.Annotation Information
PubMed ID19721433
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/19721433
StudyGenome-wide pharmacogenomic analysis of response to treatment with antipsychotics.
Disease/TraitResponse to antipsychotic treatment
Initial sample494 European ancestry cases, 244 African American and other ancestry cases
Replication sampleNA
Region9q33.3
Chromosome idchr9
Chromosome position126166744
Reported geneintergenic
Mapped geneLOC105376274 - LOC105376275
Upstream gene id105376274
Downstream gene id105376275
SNP gene ids
Upstream gene distance17617
Downstream gene distance59345
SNP risk allelers888219-?
SNPsrs888219
Merged0
SNP id current888219
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000002
Pvalue mlog6.69897000433601
P value text(risperidone)
Or beta11
%95 Ci[NR] % variance
PlatformAffymetrix, Perlegen [492900]
CNVN
Mapped traitresponse to risperidone
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097336
Study accessionGCST000473