Human SNP ID | rs888219 |
---|---|
Human chromosome | chr9 |
Human SNP position | 126166744 |
Pig chromosome | chr1 |
Pig SNP position | 300696271 |
PubMed ID | 19721433 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/19721433 |
Study | Genome-wide pharmacogenomic analysis of response to treatment with antipsychotics. |
Disease/Trait | Response to antipsychotic treatment |
Initial sample | 494 European ancestry cases, 244 African American and other ancestry cases |
Replication sample | NA |
Region | 9q33.3 |
Chromosome id | chr9 |
Chromosome position | 126166744 |
Reported gene | intergenic |
Mapped gene | LOC105376274 - LOC105376275 |
Upstream gene id | 105376274 |
Downstream gene id | 105376275 |
SNP gene ids | |
Upstream gene distance | 17617 |
Downstream gene distance | 59345 |
SNP risk allele | rs888219-? |
SNPs | rs888219 |
Merged | 0 |
SNP id current | 888219 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (risperidone) |
Or beta | 11 |
%95 Ci | [NR] % variance |
Platform | Affymetrix, Perlegen [492900] |
CNV | N |
Mapped trait | response to risperidone |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097336 |
Study accession | GCST000473 |