Human SNP ID | rs886448 |
---|---|
Human chromosome | chr7 |
Human SNP position | 24200546 |
Pig chromosome | chr18 |
Pig SNP position | 53026197 |
PubMed ID | 23829686 |
---|---|
Journal | Hum Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/23829686 |
Study | Rank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations. |
Disease/Trait | Asthma (childhood onset) |
Initial sample | 429 European ancestry affected offspring trios |
Replication sample | 52 African American affected offspring trios, 46 Hispanic affected offspring trios |
Region | 7p15.3 |
Chromosome id | chr7 |
Chromosome position | 24200546 |
Reported gene | intergenic |
Mapped gene | LOC105375188 - LOC105375189 |
Upstream gene id | 105375188 |
Downstream gene id | 105375189 |
SNP gene ids | |
Upstream gene distance | 172848 |
Downstream gene distance | 27240 |
SNP risk allele | rs886448-? |
SNPs | rs886448 |
Merged | 0 |
SNP id current | 886448 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000007 |
Pvalue mlog | 7.15490195998574 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [786195] |
CNV | N |
Mapped trait | childhood onset asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004591 |
Study accession | GCST002088 |