SNP Detail For rs886448
1.Mapping Information
Human SNP ID rs886448
Human chromosome chr7
Human SNP position 24200546
Pig chromosome chr18
Pig SNP position 53026197
2.Annotation Information
PubMed ID23829686
JournalHum Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/23829686
StudyRank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations.
Disease/TraitAsthma (childhood onset)
Initial sample429 European ancestry affected offspring trios
Replication sample52 African American affected offspring trios, 46 Hispanic affected offspring trios
Region7p15.3
Chromosome idchr7
Chromosome position24200546
Reported geneintergenic
Mapped geneLOC105375188 - LOC105375189
Upstream gene id105375188
Downstream gene id105375189
SNP gene ids
Upstream gene distance172848
Downstream gene distance27240
SNP risk allelers886448-?
SNPsrs886448
Merged0
SNP id current886448
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.00000007
Pvalue mlog7.15490195998574
P value text
Or beta
%95 Ci
PlatformAffymetrix [786195]
CNVN
Mapped traitchildhood onset asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004591
Study accessionGCST002088