Human SNP ID | rs886126 |
---|---|
Human chromosome | chr12 |
Human SNP position | 111241410 |
Pig chromosome | chr14 |
Pig SNP position | 34495094 |
PubMed ID | 23364394 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23364394 |
Study | A genome-wide association study of a coronary artery disease risk variant. |
Disease/Trait | Coronary heart disease |
Initial sample | 2,123 Korean ancestry cases, 3,591 Korean ancestry controls |
Replication sample | 3,052 Japanese ancestry cases, 4,976 Japanese ancestry controls |
Region | 12q24.11 |
Chromosome id | chr12 |
Chromosome position | 111241410 |
Reported gene | CUX2 |
Mapped gene | CUX2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23316 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs886126-T |
SNPs | rs886126 |
Merged | 0 |
SNP id current | 886126 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.66 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 1.14 |
%95 Ci | [1.08-1.20] |
Platform | Affymetrix [521786] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST001845 |