SNP Detail For rs886126
1.Mapping Information
Human SNP ID rs886126
Human chromosome chr12
Human SNP position 111241410
Pig chromosome chr14
Pig SNP position 34495094
2.Annotation Information
PubMed ID23364394
JournalJ Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23364394
StudyA genome-wide association study of a coronary artery disease risk variant.
Disease/TraitCoronary heart disease
Initial sample2,123 Korean ancestry cases, 3,591 Korean ancestry controls
Replication sample3,052 Japanese ancestry cases, 4,976 Japanese ancestry controls
Region12q24.11
Chromosome idchr12
Chromosome position111241410
Reported geneCUX2
Mapped geneCUX2
Upstream gene id
Downstream gene id
SNP gene ids23316
Upstream gene distance
Downstream gene distance
SNP risk allelers886126-T
SNPsrs886126
Merged0
SNP id current886126
Contextintron_variant
Intergenic0
Allele frequency0.66
P value0.000001
Pvalue mlog6
P value text
Or beta1.14
%95 Ci[1.08-1.20]
PlatformAffymetrix [521786]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST001845