SNP Detail For rs885389
1.Mapping Information
Human SNP ID rs885389
Human chromosome chr12
Human SNP position 131137217
Pig chromosome chr14
Pig SNP position 25522437
2.Annotation Information
PubMed ID20031603
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031603
StudyA genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
Disease/TraitRR interval (heart rate)
Initial sample2,325 European ancestry individuals
Replication sampleNA
Region12q24.33
Chromosome idchr12
Chromosome position131137217
Reported geneGPR133
Mapped geneADGRD1
Upstream gene id
Downstream gene id
SNP gene ids283383
Upstream gene distance
Downstream gene distance
SNP risk allelers885389-A
SNPsrs885389
Merged0
SNP id current885389
Contextintron_variant
Intergenic0
Allele frequency0.3
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta0.17
%95 Ci[0.11-0.23] unit decrease
PlatformIllumina [~ 318327]
CNVN
Mapped traitRR interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004831
Study accessionGCST000451