Human SNP ID | rs883079 |
---|---|
Human chromosome | chr12 |
Human SNP position | 114355435 |
Pig chromosome | chr14 |
Pig SNP position | 40259397 |
PubMed ID | 21076409 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21076409 |
Study | Common variants in 22 loci are associated with QRS duration and cardiac ventricular conduction. |
Disease/Trait | QRS duration |
Initial sample | 39,717 European ancestry individuals, 690 Orcadian individuals |
Replication sample | 7,170 European ancestry individuals |
Region | 12q24.21 |
Chromosome id | chr12 |
Chromosome position | 114355435 |
Reported gene | TBX5 |
Mapped gene | TBX5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6910 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs883079-C |
SNPs | rs883079 |
Merged | 0 |
SNP id current | 883079 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.29 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | |
Or beta | 0.49 |
%95 Ci | [0.33-0.65] ms increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | heart function measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004311 |
Study accession | GCST000872 |