Human SNP ID | rs882367 |
---|---|
Human chromosome | chr17 |
Human SNP position | 61417213 |
Pig chromosome | chr12 |
Pig SNP position | 38319637 |
PubMed ID | 25865494 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25865494 |
Study | Genome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development. |
Disease/Trait | Sitting height ratio |
Initial sample | 3,545 African Americans individuals, 12,965 European ancestry women, 8,625 European ancestry men |
Replication sample | NA |
Region | 17q23.2 |
Chromosome id | chr17 |
Chromosome position | 61417213 |
Reported gene | TBX2 |
Mapped gene | C17orf82 - TBX4 |
Upstream gene id | 388407 |
Downstream gene id | 9496 |
SNP gene ids | |
Upstream gene distance | 3933 |
Downstream gene distance | 27413 |
SNP risk allele | rs882367-C |
SNPs | rs882367 |
Merged | 0 |
SNP id current | 882367 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.334 |
P value | 0.00000000000008 |
Pvalue mlog | 13.096910013008 |
P value text | (EA) |
Or beta | 0.078 |
%95 Ci | [0.058-0.098] unit decrease |
Platform | Affymetrix, Illumina [up to 10250422] (imputed) |
CNV | N |
Mapped trait | sitting height ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007118 |
Study accession | GCST002843 |