SNP Detail For rs882367
1.Mapping Information
Human SNP ID rs882367
Human chromosome chr17
Human SNP position 61417213
Pig chromosome chr12
Pig SNP position 38319637
2.Annotation Information
PubMed ID25865494
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25865494
StudyGenome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development.
Disease/TraitSitting height ratio
Initial sample3,545 African Americans individuals, 12,965 European ancestry women, 8,625 European ancestry men
Replication sampleNA
Region17q23.2
Chromosome idchr17
Chromosome position61417213
Reported geneTBX2
Mapped geneC17orf82 - TBX4
Upstream gene id388407
Downstream gene id9496
SNP gene ids
Upstream gene distance3933
Downstream gene distance27413
SNP risk allelers882367-C
SNPsrs882367
Merged0
SNP id current882367
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.334
P value0.00000000000008
Pvalue mlog13.096910013008
P value text(EA)
Or beta0.078
%95 Ci[0.058-0.098] unit decrease
PlatformAffymetrix, Illumina [up to 10250422] (imputed)
CNVN
Mapped traitsitting height ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007118
Study accessionGCST002843