SNP Detail For rs881952
1.Mapping Information
Human SNP ID rs881952
Human chromosome chr2
Human SNP position 60661067
Pig chromosome chr3
Pig SNP position 85188461
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region2p16.1
Chromosome idchr2
Chromosome position60661067
Reported geneintergenic
Mapped geneBCL11A - LOC442017
Upstream gene id53335
Downstream gene id442017
SNP gene ids
Upstream gene distance107569
Downstream gene distance21617
SNP risk allelers881952-?
SNPsrs881952
Merged0
SNP id current881952
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000005
Pvalue mlog5.30102999566398
P value text(DI)
Or beta2.3
%95 Ci[1.28-3.32] unit decrease
PlatformIllumina [693128]
CNVN
Mapped traitdisposition index measurement, glucose homeostasis measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006832, http://www.ebi.ac.uk/efo/EFO_0006896
Study accessionGCST002726