Human SNP ID | rs879500 |
---|---|
Human chromosome | chr18 |
Human SNP position | 28544724 |
Pig chromosome | chr6 |
Pig SNP position | 105782467 |
PubMed ID | 24023788 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24023788 |
Study | Gene network analysis in a pediatric cohort identifies novel lung function genes. |
Disease/Trait | Lung function (FVC) |
Initial sample | 1,015 European ancestry individuals, 541 African American individuals |
Replication sample | NA |
Region | 18q12.1 |
Chromosome id | chr18 |
Chromosome position | 28544724 |
Reported gene | CDH2 |
Mapped gene | CDH2 - LOC105372043 |
Upstream gene id | 1000 |
Downstream gene id | 105372043 |
SNP gene ids | |
Upstream gene distance | 367243 |
Downstream gene distance | 174473 |
SNP risk allele | rs879500-? |
SNPs | rs879500 |
Merged | 0 |
SNP id current | 879500 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (EA) |
Or beta | |
%95 Ci | |
Platform | Illumina [up to 524000] |
CNV | N |
Mapped trait | vital capacity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004312 |
Study accession | GCST002162 |