SNP Detail For rs878962
1.Mapping Information
Human SNP ID rs878962
Human chromosome chr12
Human SNP position 3178113
Pig chromosome chr5
Pig SNP position 69315989
2.Annotation Information
PubMed ID23746317
JournalOral Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/23746317
StudyGenome-wide association study of degenerative bony changes of the temporomandibular joint.
Disease/TraitTemporomandibular joint disorders
Initial sample146 East Asian ancestry cases, 374 East Asian ancestry controls
Replication sample
Region12p13.33
Chromosome idchr12
Chromosome position3178113
Reported geneTSPAN9
Mapped geneTSPAN9
Upstream gene id
Downstream gene id
SNP gene ids10867
Upstream gene distance
Downstream gene distance
SNP risk allelers878962-C
SNPsrs878962
Merged0
SNP id current878962
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.89
%95 Ci[1.43-2.50]
PlatformIllumina [532935]
CNVN
Mapped traittemporomandibular joint disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005279
Study accessionGCST002029