Human SNP ID | rs875622 |
---|---|
Human chromosome | chr19 |
Human SNP position | 16356948 |
Pig chromosome | chr2 |
Pig SNP position | 60874516 |
PubMed ID | 23218918 |
---|---|
Journal | Psychiatry Res |
Link | www.ncbi.nlm.nih.gov/pubmed/23218918 |
Study | White matter integrity as an intermediate phenotype: exploratory genome-wide association analysis in individuals at high risk of bipolar disorder. |
Disease/Trait | White matter integrity |
Initial sample | 70 unaffected relatives of cases with bipolar disorder, 80 controls |
Replication sample | NA |
Region | 19p13.11 |
Chromosome id | chr19 |
Chromosome position | 16356948 |
Reported gene | EPS15L1 |
Mapped gene | EPS15L1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 58513 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs875622-? |
SNPs | rs875622 |
Merged | 0 |
SNP id current | 875622 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.19 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [565404] |
CNV | N |
Mapped trait | white matter integrity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004641 |
Study accession | GCST001760 |