Human SNP ID | rs875125 |
---|---|
Human chromosome | chr21 |
Human SNP position | 44709771 |
Pig chromosome | chr13 |
Pig SNP position | 217297058 |
PubMed ID | 26077951 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/26077951 |
Study | Genome-wide association study of corticobasal degeneration identifies risk variants shared with progressive supranuclear palsy. |
Disease/Trait | Corticobasal degeneration |
Initial sample | 152 cases, 1,986 controls |
Replication sample | NA |
Region | 21q22.3 |
Chromosome id | chr21 |
Chromosome position | 44709771 |
Reported gene | TSPEAR |
Mapped gene | TSPEAR |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54084 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs875125-? |
SNPs | rs875125 |
Merged | |
SNP id current | 875125 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 2.06 |
%95 Ci | [1.51 - 2.83] |
Platform | Illumina [533898] (imputed) |
CNV | N |
Mapped trait | Corticobasal degeneration |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_278 |
Study accession | GCST002970 |