Human SNP ID | rs871606 |
---|---|
Human chromosome | chr4 |
Human SNP position | 53933078 |
Pig chromosome | chr8 |
Pig SNP position | 42773308 |
PubMed ID | 21909110 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21909110 |
Study | Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure. |
Disease/Trait | Blood pressure |
Initial sample | 74,064 European ancestry individuals |
Replication sample | 48,607 European ancestry individuals |
Region | 4q12 |
Chromosome id | chr4 |
Chromosome position | 53933078 |
Reported gene | CHIC2 |
Mapped gene | LOC100129728 - RPL21P44 |
Upstream gene id | 100129728 |
Downstream gene id | 402176 |
SNP gene ids | |
Upstream gene distance | 4928 |
Downstream gene distance | 52408 |
SNP risk allele | rs871606-T |
SNPs | rs871606 |
Merged | 0 |
SNP id current | 871606 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.85 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (Pulse Pressure) |
Or beta | 0.429 |
%95 Ci | [0.28-0.58] mmHg increase |
Platform | Affymetrix, Illumina, Perlegen [NR] (imputed) |
CNV | N |
Mapped trait | pulse pressure measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005763 |
Study accession | GCST001235 |