SNP Detail For rs871606
1.Mapping Information
Human SNP ID rs871606
Human chromosome chr4
Human SNP position 53933078
Pig chromosome chr8
Pig SNP position 42773308
2.Annotation Information
PubMed ID21909110
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21909110
StudyGenome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure.
Disease/TraitBlood pressure
Initial sample74,064 European ancestry individuals
Replication sample48,607 European ancestry individuals
Region4q12
Chromosome idchr4
Chromosome position53933078
Reported geneCHIC2
Mapped geneLOC100129728 - RPL21P44
Upstream gene id100129728
Downstream gene id402176
SNP gene ids
Upstream gene distance4928
Downstream gene distance52408
SNP risk allelers871606-T
SNPsrs871606
Merged0
SNP id current871606
Contextintron_variant
Intergenic1
Allele frequency0.85
P value0.00000001
Pvalue mlog8
P value text(Pulse Pressure)
Or beta0.429
%95 Ci[0.28-0.58] mmHg increase
PlatformAffymetrix, Illumina, Perlegen [NR] (imputed)
CNVN
Mapped traitpulse pressure measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005763
Study accessionGCST001235