SNP Detail For rs859812
1.Mapping Information
Human SNP ID rs859812
Human chromosome chr8
Human SNP position 5736288
Pig chromosome chr15
Pig SNP position 41875277
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitNeuritic plaque
Initial sampleup to 4,232 individuals
Replication sampleNA
Region8p23.2
Chromosome idchr8
Chromosome position5736288
Reported geneintergenic
Mapped geneLOC105377794 - LOC105377795
Upstream gene id105377794
Downstream gene id105377795
SNP gene ids
Upstream gene distance139562
Downstream gene distance121986
SNP risk allelers859812-T
SNPsrs859812
Merged0
SNP id current859812
Contextintergenic_variant
Intergenic1
Allele frequency0.5045
P value0.000002
Pvalue mlog5.69897000433601
P value text(Ordinal)
Or beta0.2351
%95 Ci[0.14-0.33] unit decrease
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitneuritic plaque measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006798
Study accessionGCST002592