Human SNP ID | rs859812 |
---|---|
Human chromosome | chr8 |
Human SNP position | 5736288 |
Pig chromosome | chr15 |
Pig SNP position | 41875277 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Neuritic plaque |
Initial sample | up to 4,232 individuals |
Replication sample | NA |
Region | 8p23.2 |
Chromosome id | chr8 |
Chromosome position | 5736288 |
Reported gene | intergenic |
Mapped gene | LOC105377794 - LOC105377795 |
Upstream gene id | 105377794 |
Downstream gene id | 105377795 |
SNP gene ids | |
Upstream gene distance | 139562 |
Downstream gene distance | 121986 |
SNP risk allele | rs859812-T |
SNPs | rs859812 |
Merged | 0 |
SNP id current | 859812 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.5045 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Ordinal) |
Or beta | 0.2351 |
%95 Ci | [0.14-0.33] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | neuritic plaque measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006798 |
Study accession | GCST002592 |