Human SNP ID | rs854555 |
---|---|
Human chromosome | chr7 |
Human SNP position | 95301079 |
Pig chromosome | chr9 |
Pig SNP position | 82251215 |
PubMed ID | 18615156 |
---|---|
Journal | Mol Med |
Link | www.ncbi.nlm.nih.gov/pubmed/18615156 |
Study | Genome-wide association scan identifies candidate polymorphisms associated with differential response to anti-TNF treatment in rheumatoid arthritis. |
Disease/Trait | Response to TNF antagonist treatment |
Initial sample | 89 European ancestry cases |
Replication sample | NA |
Region | 7q21.3 |
Chromosome id | chr7 |
Chromosome position | 95301079 |
Reported gene | PON1 |
Mapped gene | PON1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5444 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs854555-A |
SNPs | rs854555 |
Merged | 0 |
SNP id current | 854555 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.34 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [283348] |
CNV | N |
Mapped trait | response to TNF antagonist |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004653 |
Study accession | GCST000211 |