SNP Detail For rs854555
1.Mapping Information
Human SNP ID rs854555
Human chromosome chr7
Human SNP position 95301079
Pig chromosome chr9
Pig SNP position 82251215
2.Annotation Information
PubMed ID18615156
JournalMol Med
Linkwww.ncbi.nlm.nih.gov/pubmed/18615156
StudyGenome-wide association scan identifies candidate polymorphisms associated with differential response to anti-TNF treatment in rheumatoid arthritis.
Disease/TraitResponse to TNF antagonist treatment
Initial sample89 European ancestry cases
Replication sampleNA
Region7q21.3
Chromosome idchr7
Chromosome position95301079
Reported genePON1
Mapped genePON1
Upstream gene id
Downstream gene id
SNP gene ids5444
Upstream gene distance
Downstream gene distance
SNP risk allelers854555-A
SNPsrs854555
Merged0
SNP id current854555
Contextintron_variant
Intergenic0
Allele frequency0.34
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [283348]
CNVN
Mapped traitresponse to TNF antagonist
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004653
Study accessionGCST000211