SNP Detail For rs8523
1.Mapping Information
Human SNP ID rs8523
Human chromosome chr6
Human SNP position 10980820
Pig chromosome chr7
Pig SNP position 7977026
2.Annotation Information
PubMed ID25500335
JournalProstaglandins Leukot Essent Fatty Acids
Linkwww.ncbi.nlm.nih.gov/pubmed/25500335
StudyA genome-wide association study of saturated, mono- and polyunsaturated red blood cell fatty acids in the Framingham Heart Offspring Study.
Disease/TraitRed blood cell fatty acid levels
Initial sample2,633 individuals
Replication sampleNA
Region6p24.2
Chromosome idchr6
Chromosome position10980820
Reported geneSYCP2L, ELOVL2
Mapped geneELOVL2
Upstream gene id
Downstream gene id
SNP gene ids54898
Upstream gene distance
Downstream gene distance
SNP risk allelers8523-A
SNPsrs8523
Merged0
SNP id current8523
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.44
P value0.000000004
Pvalue mlog8.39794000867203
P value text(DPA-n3)
Or beta0.115
%95 Ci[NR] unit increase
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitfatty acid measurement, docosapentaenoic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005110, http://www.ebi.ac.uk/efo/EFO_0006809
Study accessionGCST002712