Human SNP ID | rs8523 |
---|---|
Human chromosome | chr6 |
Human SNP position | 10980820 |
Pig chromosome | chr7 |
Pig SNP position | 7977026 |
PubMed ID | 25500335 |
---|---|
Journal | Prostaglandins Leukot Essent Fatty Acids |
Link | www.ncbi.nlm.nih.gov/pubmed/25500335 |
Study | A genome-wide association study of saturated, mono- and polyunsaturated red blood cell fatty acids in the Framingham Heart Offspring Study. |
Disease/Trait | Red blood cell fatty acid levels |
Initial sample | 2,633 individuals |
Replication sample | NA |
Region | 6p24.2 |
Chromosome id | chr6 |
Chromosome position | 10980820 |
Reported gene | SYCP2L, ELOVL2 |
Mapped gene | ELOVL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54898 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8523-A |
SNPs | rs8523 |
Merged | 0 |
SNP id current | 8523 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.44 |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | (DPA-n3) |
Or beta | 0.115 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | fatty acid measurement, docosapentaenoic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005110, http://www.ebi.ac.uk/efo/EFO_0006809 |
Study accession | GCST002712 |