SNP Detail For rs848452
1.Mapping Information
Human SNP ID rs848452
Human chromosome chr7
Human SNP position 77967495
Pig chromosome chr9
Pig SNP position 112733802
2.Annotation Information
PubMed ID23064961
JournalJ Dent Res
Linkwww.ncbi.nlm.nih.gov/pubmed/23064961
StudyGWAS of dental caries patterns in the permanent dentition.
Disease/TraitDental caries
Initial sample920 European ancestry individuals
Replication sampleNA
Region7q21.11
Chromosome idchr7
Chromosome position77967495
Reported genePHTF2
Mapped genePHTF2 - LOC105375368
Upstream gene id57157
Downstream gene id105375368
SNP gene ids
Upstream gene distance9991
Downstream gene distance22894
SNP risk allelers848452-?
SNPsrs848452
Merged0
SNP id current848452
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(DMFS2)
Or beta
%95 Ci
PlatformIllumina [518997]
CNVN
Mapped traitdental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003819
Study accessionGCST001713