Human SNP ID | rs848452 |
---|---|
Human chromosome | chr7 |
Human SNP position | 77967495 |
Pig chromosome | chr9 |
Pig SNP position | 112733802 |
PubMed ID | 23064961 |
---|---|
Journal | J Dent Res |
Link | www.ncbi.nlm.nih.gov/pubmed/23064961 |
Study | GWAS of dental caries patterns in the permanent dentition. |
Disease/Trait | Dental caries |
Initial sample | 920 European ancestry individuals |
Replication sample | NA |
Region | 7q21.11 |
Chromosome id | chr7 |
Chromosome position | 77967495 |
Reported gene | PHTF2 |
Mapped gene | PHTF2 - LOC105375368 |
Upstream gene id | 57157 |
Downstream gene id | 105375368 |
SNP gene ids | |
Upstream gene distance | 9991 |
Downstream gene distance | 22894 |
SNP risk allele | rs848452-? |
SNPs | rs848452 |
Merged | 0 |
SNP id current | 848452 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (DMFS2) |
Or beta | |
%95 Ci | |
Platform | Illumina [518997] |
CNV | N |
Mapped trait | dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003819 |
Study accession | GCST001713 |