Human SNP ID | rs844917 |
---|---|
Human chromosome | chr20 |
Human SNP position | 23161018 |
Pig chromosome | chr17 |
Pig SNP position | 34391987 |
PubMed ID | 24124411 |
---|---|
Journal | Genomics Inform |
Link | www.ncbi.nlm.nih.gov/pubmed/24124411 |
Study | Genome-wide association study of liver enzymes in korean children. |
Disease/Trait | Liver enzyme levels (alanine transaminase) |
Initial sample | 484 Korean ancestry children |
Replication sample | NA |
Region | 20p11.21 |
Chromosome id | chr20 |
Chromosome position | 23161018 |
Reported gene | CD93 |
Mapped gene | LOC100505664 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100505664 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs844917-A |
SNPs | rs844917 |
Merged | 0 |
SNP id current | 844917 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.041 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.111 |
%95 Ci | [0.064-0.158] unit increase |
Platform | Illumina [747076] |
CNV | N |
Mapped trait | serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST002207 |