Human SNP ID | rs830884 |
---|---|
Human chromosome | chr5 |
Human SNP position | 52724562 |
Pig chromosome | chr16 |
Pig SNP position | 33874914 |
PubMed ID | 22020760 |
---|---|
Journal | Cancer |
Link | www.ncbi.nlm.nih.gov/pubmed/22020760 |
Study | Polymorphic markers associated with severe oxaliplatin-induced, chronic peripheral neuropathy in colon cancer patients. |
Disease/Trait | Response to platinum-based agents |
Initial sample | 96 colon cancer cases |
Replication sample | 247 colon cancer cases |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 52724562 |
Reported gene | ITGA1, PELO |
Mapped gene | LOC105378964 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378964 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs830884-? |
SNPs | rs830884 |
Merged | 0 |
SNP id current | 830884 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 3.13 |
%95 Ci | [1.85-5.26] |
Platform | Affymetrix [656843] |
CNV | N |
Mapped trait | response to platinum based chemotherapy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004647 |
Study accession | GCST001291 |