SNP Detail For rs830884
1.Mapping Information
Human SNP ID rs830884
Human chromosome chr5
Human SNP position 52724562
Pig chromosome chr16
Pig SNP position 33874914
2.Annotation Information
PubMed ID22020760
JournalCancer
Linkwww.ncbi.nlm.nih.gov/pubmed/22020760
StudyPolymorphic markers associated with severe oxaliplatin-induced, chronic peripheral neuropathy in colon cancer patients.
Disease/TraitResponse to platinum-based agents
Initial sample96 colon cancer cases
Replication sample247 colon cancer cases
Region5q11.2
Chromosome idchr5
Chromosome position52724562
Reported geneITGA1, PELO
Mapped geneLOC105378964
Upstream gene id
Downstream gene id
SNP gene ids105378964
Upstream gene distance
Downstream gene distance
SNP risk allelers830884-?
SNPsrs830884
Merged0
SNP id current830884
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta3.13
%95 Ci[1.85-5.26]
PlatformAffymetrix [656843]
CNVN
Mapped traitresponse to platinum based chemotherapy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004647
Study accessionGCST001291