Human SNP ID | rs830124 |
---|---|
Human chromosome | chr12 |
Human SNP position | 121957871 |
Pig chromosome | chr14 |
Pig SNP position | 32562006 |
PubMed ID | 21572414 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21572414 |
Study | A genome-wide association study of metabolic traits in human urine. |
Disease/Trait | Urinary metabolites |
Initial sample | 862 European ancestry male individuals |
Replication sample | 1,862 European ancestry individuals |
Region | 12q24.31 |
Chromosome id | chr12 |
Chromosome position | 121957871 |
Reported gene | WDR66, HPD |
Mapped gene | WDR66 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 144406 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs830124-A |
SNPs | rs830124 |
Merged | 0 |
SNP id current | 830124 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.152 |
P value | 1E-46 |
Pvalue mlog | 46 |
P value text | (2-Hydroxyisobutyrate concentration) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [645249] |
CNV | N |
Mapped trait | metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004725 |
Study accession | GCST001073 |