SNP Detail For rs827382
1.Mapping Information
Human SNP ID rs827382
Human chromosome chr10
Human SNP position 8677306
Pig chromosome chr10
Pig SNP position 69071006
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine
Initial sample23,285 European ancestry cases, 95,425 European ancestry controls
Replication sampleNA
Region10p14
Chromosome idchr10
Chromosome position8677306
Reported geneintergenic
Mapped geneLOC105376400
Upstream gene id
Downstream gene id
SNP gene ids105376400
Upstream gene distance
Downstream gene distance
SNP risk allelers827382-C
SNPsrs827382
Merged0
SNP id current827382
Contextintergenic_variant
Intergenic0
Allele frequency0.25
P value0.00000009
Pvalue mlog7.04575749056067
P value text
Or beta1.07
%95 Ci[1.04-1.10]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002081