SNP Detail For rs826838
1.Mapping Information
Human SNP ID rs826838
Human chromosome chr12
Human SNP position 38712929
Pig chromosome chr5
Pig SNP position 72856595
2.Annotation Information
PubMed ID23583979
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583979
StudyIdentification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.
Disease/TraitHeart rate
Initial sample85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals
Replication sample88,823 European ancestry individuals
Region12q12
Chromosome idchr12
Chromosome position38712929
Reported geneCPNE8
Mapped geneCPNE8
Upstream gene id
Downstream gene id
SNP gene ids144402
Upstream gene distance
Downstream gene distance
SNP risk allelers826838-C
SNPsrs826838
Merged0
SNP id current826838
Contextintron_variant
Intergenic0
Allele frequency0.443
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta0.234
%95 Ci[0.15-0.32] unit increase
PlatformAffymetrix, Illumina [2516789] (imputed)
CNVN
Mapped traitheart rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004326
Study accessionGCST001969